Do you climb more floors when moving from an apartment to a house?

I continue to explore data about my physical activity in 2013 ( see part 1). We moved from an apartment (on the third floor of a building) to a house (with two floors) on July 1st, 2013. I was wondering if the change would have an impact on the number of floors I climbed: I now have to climb to reach bedrooms and go down to go in the living room. A standard house. ...

December 25, 2013 · 2 min · jepoirrier

2013 with Fitbits

2013 is near its end and it’s time to see what happened during the last 360 days or so. Many things happened (graduated from MBA, new house, holidays, ill a few days, …) but I wanted to know if one could quantify these changes and how these changes would impact my daily physical activity. For that purpose I bought a Fitbit One in March 2013. I chose Fitbit over other devices available because of the price (99 USD at the time) and because it was available in Europe (via a Dutch vendor). At that time the Jawbone Up was unavailable (even in the USA) and the Nike Fuelband couldn’t track my sleep. ...

December 23, 2013 · 6 min · jepoirrier

Belgium doesn't score well in the Open Data Index (not speaking about health!)

The Open Knowledge Foundation (OKF) released the Open Data Index, along with details on how their methodology. The index contains 70 countries, with UK having the best score and Cyprus the worst score. In fact the first places are trusted by the UK, the USA and the Northern European countries (Denmark, Norway, Finland, Sweden). And Belgium? Well, Belgium did not score very well: 265 / 1,000. The figure below shows its aggregated score (with green: yes, red: no, blue: unsure). ...

November 11, 2013 · 3 min · jepoirrier

Map of GAVI eligible countries in R

I was trying to reproduce the map of the GAVI Alliance eligible countries (btw I was surprised India is eligible - but that’s the beauty of relying on numbers only and not assumptions) in R. This is the original map (there are 57 countries eligible): I started to use the R package rworldmap because it seemed the most appropriate for this task. Everything went fine. Most of the time was spent converting the list of countries from plain English to plain “ISO3” code as required (ISO3 is in fact ISO 3166-1 alpha-3). I took my source from Wikipedia. ...

February 10, 2013 · 3 min · jepoirrier

Today is world diabetes day (Merck ends MK-0431E)

As WHO and other organisations are celebrating World Diabetes Day (WDD) it is always sad to read that a new potential drug is stopped. This time Merck & co. stopped the clinical trial MK-0431E studying the co-administration of Sitagliptin and Atorvastatin in inadequately controlled Type 2 Diabetes Mellitus. Merck cites “business reasons” without further explanations. Sitagliptin is sold under the trade name Januvia. It is an oral antihyperglycemic and one of the (if not the) best selling product of Merck with US$975 million revenue in the third quarter of 2012. On the other hand Atorvastatin is a statin lowering blood cholesterol. It was a blockbuster for Pfizer (sold under the trade name of Lipitor) until its patent expired. ...

November 14, 2012 · 1 min · jepoirrier

Happy Halloween! (Pharma Q3 results and job losses so far)

Happy Halloween! It’s the season for Q3 reports a bit everywhere so also in Pharma: Abbott (↑), Elan (↑), Eli Lilly (↓), Bristol-Myers Squibb (↓), Sanofi (↓), Novartis (↓), Shire (↑), AstraZeneca (↓), Merck & Co (↑), Novo Nordisk (↑), GlaxoSmithKline (↓), … ...

November 1, 2012 · 1 min · jepoirrier

Idea shared #2 - the feedback toothbrush

After the T-shirt that measures your sleep better than an app, here is idea #2: the toothbrush that provides some feedback. The idea is simple - so simple it was already applied elsewhere. The idea is to provide feedback about the quality of the way people brush their teeth. The Brushduino focuses on entertaining kids to keep them brushing at the right place for the right amount of time. Other projects (with many variants) focus specifically on time spent brushing. ...

October 22, 2012 · 2 min · jepoirrier

Idea shared #1 - measure your sleep

I don’t consider having more or better ideas than others. But I gradually realized I have less and less time for some activities like programming, electronics etc. Maybe that’s how we realize we are getting older now adults. So I decided to share these ideas rather than fueling the illusory idea that I will implement them one day. So idea 1 is about measuring sleep. I recorded animals’sleep during my Ph.D. - but it was thanks to an EEG device. I think that if you want to understand or improve something you have to first measure it in a way or another. So I started to try to measure my own sleep with an app ( Sleep Cycle). But despite its good reviews it doesn’t work, at least for me. ...

September 22, 2012 · 4 min · jepoirrier

Forget pills, here comes e-pills!

The US FDA recently approved Proteus Digital Health Ingestion Event Marker ( IEM). Basically, it’s a pill with some electronics attached (very tiny electronics: around 0.5mm in diameter for a total weigth of 5mg, see picture below). Once activated the pill transmit a signal and, coupled with a detector, you know when the pill got into your body. Edible sensor for electronically confirming adherence to oral medications. ...

August 15, 2012 · 5 min · jepoirrier

Effects of Tobacco on health - visualized

As you probably know I am interested in both diseases (and health in general) as well as visualization. Recently Online Nursing Programs (*) invited me to have a look at their latest infographics about the effects of tobacco on health ( directly to figure). Although numbers seem correct (references are at the bottom), although they intelligently re-use the presentation of some well-known tobacco companies, there is one thing that I don’t like that much: like this sentence, the figure is very, very long. You have to scroll many pages in order to see everything. It may look like a story but it is not presented as such (I mean: there are no clear marks of different steps in the story, except the three “chapters”). On the right is the complete figure in exactly 800 pixels of height - can you read something? GOOD.is solved this issue by using a Flash player that allows the viewer to woom in/out and go to different sections of the figure ( see here for instance). ...

July 17, 2012 · 2 min · jepoirrier